Ciceribacter sichuanensis sp. nov., a plant growth promoting rhizobacterium isolated from root nodules of soybean in Sichuan, China.

The fast-growing rhizobia-like strains S101T and S153, isolated from root nodules of soybean (Glycine max) in Sichuan, People's Republic of China, underwent characterization using a polyphasic taxonomy approach. The strains exhibited growth at 20-40 °C (optimum, 28 °C), pH 4.0-10.0 (optimum, pH 7.0) and up to 2.0% (w/v) NaCl (optimum, 0.01%) on Yeast Mannitol Agar plates. The 16S rRNA gene of strain S101T showed 98.4% sequence similarity to the closest type strain, Ciceribacter daejeonense L61T. Major cellular fatty acids in strain S101T included summed feature 8 (C18:1ω7c and/or C18:1ω6c) and C19:0 cyclo ω8c. The predominant quinone was ubiquinone-10. The polar lipids of strain S101T included diphosphatidylglycerol, phosphatidylglycerol, phosphatidylmethyl ethanolamine, phosphatidyl ethanolamine, amino phospholipid, unidentified phosphoglycolipid and unidentified amino-containing lipids. The DNA G + C contents of S101T and S153 were 61.1 and 61.3 mol%, respectively. Digital DNA-DNA hybridization relatedness and average nucleotide identity values between S101T and C. daejeonense L61T were 46.2% and 91.4-92.2%, respectively. In addition, strain S101T promoted the growth of soybean and carried nitrogen fixation genes in its genome, hinting at potential applications in sustainable agriculture. We propose that strains S101T and S153 represent a novel species, named Ciceribacter sichuanensis sp. nov., with strain S101T as the type strain (= CGMCC 1.61309 T = JCM 35649 T).

phoD-harboring bacterial community composition dominates organic P mineralization under long-term P fertilization in acid purple soil.

Introduction: A better understanding of the regulatory role of microorganisms on soil phosphorous (P) mobilization is critical for developing sustainable fertilization practices and reducing P resource scarcity. The phoD genes regulate soil organic P (Po) mobilization. Methods: Based on the long-term P application experiments in acid purple soil of maize system in Southwest China (started in 2010), the experiment included five P levels: 0, 16, 33, 49, and 65.5 kg P hm-2 (P0, P16, P33, P49, and P65.5, respectively). The molecular speciation of organic P in soil was determined by 31P-nuclear magnetic resonance (NMR), high-throughput sequencing technology, and real-time qPCR were used to analyze the bacterial community and abundance of phoD-harboring bacterial genes, exploring the bacterial community and abundance characteristics of phoD gene and its relationship with the forms of Po and alkaline phosphatase (ALP) activity in the soil. Results: The results showed that the orthophosphate monoesters (OM) were the main Po speciation and varied by P fertilization in acid purple soil. ALP activity decreased as P fertilization increased. Co-occurrence network analysis identified the overall network under five P fertilizations. The keystone taxon base on the network showed that Collimonas, Roseateles, Mesorhizobium, and Cellulomonas positively correlated with both OM and Po. The random forest showed that Cellulomonas, Roseateles, and Rhodoplanes were the key predictors for ALP activity. The keystone taxon was a more important predictor than the dominant taxon for ALP, OM, and Po. The structural equation model (SEM) showed that soil organic matter (SOM), available P (AP), and OM were the main factors influencing the ALP by reshaping phoD-harboring bacteria alpha diversity, community composition, and phoD abundance. Discussion: The phoD-harboring bacterial community composition especially the keystone taxon rather than alpha diversity and abundance dominated the ALP activity, which could promote P utilization over an intensive agroecosystem. These findings improve the understanding of how long-term gradient fertilization influences the community composition and function of P-solubilizing microorganisms in acid purple soil.

Environmental impacts, human health, and energy consumption of nitrogen management for maize production in subtropical region.

Over-application of fertilizers could not improve crop yield and agronomic efficiency, but result in increasing nitrogen (N) surplus and adverse effects on the ecosystem sustainability. Although some previous studies have addressed one or a few environmental aspects in crop production, an integrated assessment for the effects of N fertilizer on multiple environmental impacts, and the optional steps of normalization and weighting is required. A consecutive 2-year plot-based field experiment was conducted with five N fertilizer levels (0, 90, 180, 270, and 360 kg N ha-1) in maize production at three sites in Southwest China, to evaluate the environmental performance and sustainability through joint use of life cycle assessment (LCA) and energy consumption analysis. Results demonstrated that the optimal N rate (180 kg N ha-1) showed greater potential for maintaining high yield (achieved 86% of the yield potential) and reducing the global warming (- 31%), acidification (- 47%), eutrophication (- 44%) compared to farmers' practice, and energy depletion potentials, by reducing pollutants emission during the production and transportation of N fertilizer and Nr losses at farm stage. Optimal N treatment indirectly reduced the land use, life-cycle human toxicity, aquatic eco-toxicity, and terrestrial eco-toxicity potentials by improving grain yield and agronomic efficiency. In addition, the optimal N treatment reduced the energy consumption by enhancing the energy use efficiency (EUE) (+ 74%) and reducing non-renewable energy form (- 45%) than the farmer's practice. This study will provide comprehensive information for both scientists and farmers involved in maize production and N management in subtropical region.

Nitrogen leaching and grey water footprint affected by nitrogen fertilization rate in maize production: a case study of Southwest China.

BACKGROUND: Effective nitrogen (N) management measures are required to control environmental problems caused by N fertilizer use in intensive maize production systems. Soil N losses associated with high precipitation and over-fertilization in maize production can cause substantial environmental problems, whereas there is a lack of quantitative data and effective study countermeasures. A 2-year field study was conducted in the subtropical maize production system in Southwest China to quantify N leaching under varying N application rates of 0, 90, 180, 270 and 360 kg N ha-1  yr-1 . RESULTS: The results indicated that N leaching accounted for 16-38% of N fertilizer input. For farmer practice treatment (360 kg N ha-1  yr-1 ), N leaching loss was high at 110 kg N ha-1  yr-1 and accounted for 31% of the N applied. As an indicator of the ambient water quality pollution, the grey water footprint across all treatments ranged from 376 to 1092 m3 Mg-1 , with an average of 695 m3 Mg-1 . Reducing N rate to agronomically optimized treatment (180 kg N ha-1  yr-1 ) significantly decreased N leaching by 77%, and maintained high grain yield of 8.1 Mg ha-1 . The grey water footprint was reduced by 52-63% with N rates from 270 or 360 kg N ha-1  yr-1 to 180 kg N ha-1  yr-1 . CONCLUSION: Nitrogen surplus (applied N rate minus N uptake by maize) resulted in higher soil residual nitrate concentration and consequently high N leaching. High precipitation and low soil pH were the main ecological factors leading to high N leaching. © 2021 Society of Chemical Industry.

Vappolotes, a new genus of coelotine spiders (Araneae, Agelenidae) from Guizhou, China.

A new genus of the subfamily Coelotinae F.O. Pickard-Cambridge, 1893, Vappolotes Zhao et S. Li gen. n., with two new species, V. ganlongensis Zhao et S. Li sp. n. (♂♀) and V. jianpingensis Zhao et S. Li sp. n. (♀), is described. The genus is restricted to southern China (Guizhou). Its relationship to other coelotine genera is discussed. A partial fragment of the mitochondrial cytochrome oxidase subunit I of both species were obtained to aid species identification at the molecular level.

Rational Phosphorus Application Facilitates the Sustainability of the Wheat/Maize/Soybean Relay Strip Intercropping System.

Wheat (Triticum aestivum L.)/maize (Zea mays L.)/soybean (Glycine max L.) relay strip intercropping (W/M/S) system is commonly used by the smallholders in the Southwest of China. However, little known is how to manage phosphorus (P) to enhance P use efficiency of the W/M/S system and to mitigate P leaching that is a major source of pollution. Field experiments were carried out in 2011, 2012, and 2013 to test the impact of five P application rates on yield and P use efficiency of the W/M/S system. The study measured grain yield, shoot P uptake, apparent P recovery efficiency (PRE) and soil P content. A linear-plateau model was used to determine the critical P rate that maximizes gains in the indexes of system productivity. The results show that increase in P application rates aggrandized shoot P uptake and crops yields at threshold rates of 70 and 71.5 kg P ha-1 respectively. With P application rates increasing, the W/M/S system decreased the PRE from 35.9% to 12.3% averaged over the three years. A rational P application rate, 72 kg P ha-1, or an appropriate soil Olsen-P level, 19.1 mg kg-1, drives the W/M/S system to maximize total grain yield while minimizing P surplus, as a result of the PRE up to 28.0%. We conclude that rational P application is an important approach for relay intercropping to produce high yield while mitigating P pollution and the rational P application-based integrated P fertilizer management is vital for sustainable intensification of agriculture in the Southwest of China.

[Genetic diversity and phylogeny of soybean rhizobia isolated from the Hilly area of Central Sichuan in China].

OBJECTIVE: We investigated the genetic diversity and phylogeny of 28 rhizobial isolates from root nodules of soybean growing in the Hilly Area of Central Sichuan in China. METHODS: We used 16S rDNA PCR-RFLP and phylogenetic analyses of the 16S rDNA, glnII and symbiotic genes (nodC). RESULTS: Five 16S rDNA genotypes among the isolates were distinguished with restriction endonucleases Hae III, Hinf I, Msp I and Taq I. In the 16S rDNA PCR-RFLP analysis, all the isolates are divided into Bradyrhizobium group and Sinonrhizobium group at the 83% level, and Sinonrhizobium strains accounted for 75% of the isolates. The phylogenetic analyses of 16S rDNA, glnII and nodC show that 4 representative strains SCAUs1, SCAUs2, SCAUs7 and SCAUs4 were closely related to S. fredii USDA205(T) while the other 2 representative strains SCAUs3 and SCAUs5 were closely related to B. yuanmingense CCBAU10071(T) and B. diazoefficiens USDA110(T). The 16S rDNA, glnII and nodC sequence similarity of 4 Sinonrhizobium representative strains were 98.3% - 99.9%, 98.2% - 100% and 100%, respectively. CONCLUSION: Soybean rhizobia isolated from the Hilly Area of Central Sichuan in China has rich genetic diversity, S. fredii was the predominant genus.

[Symbiotic efficiency and genetic diversity of the rhizobia isolated from Leucaena leucocephala in Liangshan Prefecture].

OBJECTIVE: We analyzed the symbiotic efficiency and genetic diversity of rhizobia isolated from Leucaena leucocephala in Liangshan Prefecture of SichuanProvince. METHODS: We studied genetic diversity of these isolates with 16S rRNA RFLP, BOX-PCR and AFLP fingerprinting, and constructed phylogenetic tree based on the concatenated sequences of the four housekeeping genes 16S rRNA, recA, atpD and glnII. The nodulation ability and the symbiotic efficiency of the isolates were tested by plant inoculation assay on their original host plant. RESULTS: Genetic diversity and phylogenetic tree indicate that 26 isolates were assigned as Sinorhizobium, 3 Bradyrhizobium, 3 Rhizobium and 1 Mesorhizobium. SCAU203 might represent a new Rhizobium group, SCAU211 might represent a new Bradyrhizobium group, the other three representative strains were located in three phylogenic branches and closely related to S. americanum, M. plurifarium and R. huautlense, respectively. In the nodulation and symbiotic efficiency assay, only 2 of the 20 isolates promoted the growth of L. leucocephala, but 3 isolates had a growth slowing effect on the host, while the other isolates (84%) were ineffective on symbiotic nitrogen fixation. CONCLUSION: The majority of rhizobia isolated from L. leucocephala in Liangshan Prefecture were ineffective on symbiotic nitrogen fixation.

[Effects of phosphorus fertilization on leaf area index, biomass accumulation and allocation, and phosphorus use efficiency of intercropped maize].

A 2-year field experiment was conducted in 2011 and 2012 to investigate the effects of phosphorus (P) fertilization on the leaf area index (LAI), dry matter accumulation (DMA), and P use efficiency (PUE) of maize in wheat/maize/soybean intercropping system. Five P fertilization rates were installed, i.e., 0, 45, 90, 135, and 180 kg P2O5 x hm(-2) for wheat, marked as WP0, WP1, WP2, WP3, and WP4, respectively, and 0, 37.5, 75, 112.5, and 150 kg P2O5 x hm(-2) for maize, marked as MP0, MP1, MP2, MP3, and MP4, respectively. During the coexisted growth periods of wheat and maize, P fertilization increased the LAI, leaf area duration (LAD), and stem and leaf DMA of maize significantly. After the jointing stage of maize, the maize LAI, LAD, DMA, and crop growth rate (CGR) all decreased after an initial increase with the increasing P rate, with the maximum growth in treatment MP2 or MP3. During the reproductive stage of maize, the maize dry mass translocation from vegetative to reproductive organ increased with increasing P fertilization rate, and the grain yield of both maize and whole cropping system increased firstly and decreased then, with the maximum grain yield of maize and whole cropping system being 6588 and 11955 kg x hm(-2) in treatment P3, respectively. The P apparent recovery efficiency of maize was the highest (26.3%) in treatment MP2, being 82.6%, 38.4%, and 152.9% higher than that in MP1 (14.4%), MP3 (19.0%), and MP4 (10.4%), respectively. In sum, for the wheat/maize/soybean intercropping system, applying appropriate amount of P fertilizer could promote maize growth, alleviate the impact of wheat on maize, and consequently, increase the P apparent recovery efficiency of maize. In this study, the appropriate P fertilization rate was 75-112.5 kg P2O5 x hm(-2).